Agent Skills: ClickHouse Schema Design (Core Workflow A)

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UncategorizedID: jeremylongshore/claude-code-plugins-plus-skills/clickhouse-core-workflow-a

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Skill Metadata

Name
clickhouse-core-workflow-a
Description
'Design ClickHouse schemas with MergeTree engines, ORDER BY keys, and

ClickHouse Schema Design (Core Workflow A)

Overview

Design ClickHouse tables with correct engine selection, ORDER BY keys, partitioning, and codec choices for analytical workloads.

Prerequisites

  • @clickhouse/client connected (see clickhouse-install-auth)
  • Understanding of your query patterns (what you filter and group on)

Instructions

Step 1: Choose the Right Engine

| Engine | Best For | Dedup? | Example | |--------|----------|--------|---------| | MergeTree | General analytics, append-only logs | No | Clickstream, IoT | | ReplacingMergeTree | Mutable rows (upserts) | Yes (on merge) | User profiles, state | | SummingMergeTree | Pre-aggregated counters | Sums numerics | Page view counts | | AggregatingMergeTree | Materialized view targets | Merges states | Dashboards | | CollapsingMergeTree | Stateful row updates | Collapses +-1 | Shopping carts |

ClickHouse Cloud uses SharedMergeTree — it is a drop-in replacement for MergeTree on Cloud. You do not need to change your DDL.

Step 2: Design the ORDER BY (Sort Key)

The ORDER BY clause is the single most important schema decision. It defines:

  • Primary index — sparse index over sort-key granules (8192 rows default)
  • Data layout on disk — rows sorted physically by these columns
  • Query speed — queries filtering on ORDER BY prefix columns hit fewer granules

Rules of thumb:

  1. Put low-cardinality filter columns first (event_type, status)
  2. Then high-cardinality columns you filter on (user_id, tenant_id)
  3. End with a time column if you use range filters (created_at)
  4. Do NOT put high-cardinality columns you never filter on in ORDER BY
-- Good: filter by tenant, then by time ranges
ORDER BY (tenant_id, event_type, created_at)

-- Bad: UUID first means every query scans the full index
ORDER BY (event_id, created_at)  -- event_id is random UUID

Step 3: Schema Examples

Event Analytics Table

CREATE TABLE analytics.events (
    event_id     UUID DEFAULT generateUUIDv4(),
    tenant_id    UInt32,
    event_type   LowCardinality(String),
    user_id      UInt64,
    session_id   String,
    properties   String CODEC(ZSTD(3)),  -- JSON blob, compress well
    url          String CODEC(ZSTD(1)),
    ip_address   IPv4,
    country      LowCardinality(FixedString(2)),
    created_at   DateTime64(3) DEFAULT now64(3)
)
ENGINE = MergeTree()
ORDER BY (tenant_id, event_type, toDate(created_at), user_id)
PARTITION BY toYYYYMM(created_at)
TTL created_at + INTERVAL 1 YEAR
SETTINGS index_granularity = 8192;

User Profile Table (Upserts)

CREATE TABLE analytics.users (
    user_id      UInt64,
    email        String,
    plan         LowCardinality(String),
    mrr_cents    UInt32,
    properties   String CODEC(ZSTD(3)),
    updated_at   DateTime DEFAULT now()
)
ENGINE = ReplacingMergeTree(updated_at)   -- keeps latest row per ORDER BY key
ORDER BY user_id;

-- Query with FINAL to get deduplicated results
SELECT * FROM analytics.users FINAL WHERE user_id = 42;

Daily Aggregation Table

CREATE TABLE analytics.daily_stats (
    date         Date,
    tenant_id    UInt32,
    event_type   LowCardinality(String),
    event_count  UInt64,
    unique_users AggregateFunction(uniq, UInt64)
)
ENGINE = AggregatingMergeTree()
ORDER BY (tenant_id, event_type, date);

Step 4: Partitioning Guidelines

| Partition Expression | Typical Use | Parts Per Partition | |---------------------|-------------|---------------------| | toYYYYMM(date) | Most common — monthly | Target 10-1000 | | toMonday(date) | Weekly rollups | More parts, finer drops | | toYYYYMMDD(date) | Daily TTL drops | Many parts — use carefully | | None | Small tables (<1M rows) | Fine |

Warning: Each partition creates separate parts on disk. Over-partitioning (e.g., by user_id) creates millions of tiny parts and kills performance.

Step 5: Codecs and Compression

-- Column-level compression codecs
column1  UInt64 CODEC(Delta, ZSTD(3)),      -- Time series / sequential IDs
column2  Float64 CODEC(Gorilla, ZSTD(1)),   -- Floating point (similar values)
column3  String CODEC(ZSTD(3)),              -- General text / JSON
column4  DateTime CODEC(DoubleDelta, ZSTD),  -- Timestamps (near-sequential)

Applying Schema via Node.js

import { createClient } from '@clickhouse/client';

const client = createClient({ url: process.env.CLICKHOUSE_HOST! });

async function applySchema() {
  await client.command({ query: 'CREATE DATABASE IF NOT EXISTS analytics' });

  await client.command({
    query: `
      CREATE TABLE IF NOT EXISTS analytics.events (
        event_id   UUID DEFAULT generateUUIDv4(),
        tenant_id  UInt32,
        event_type LowCardinality(String),
        user_id    UInt64,
        payload    String CODEC(ZSTD(3)),
        created_at DateTime DEFAULT now()
      )
      ENGINE = MergeTree()
      ORDER BY (tenant_id, event_type, created_at)
      PARTITION BY toYYYYMM(created_at)
    `,
  });

  console.log('Schema applied.');
}

Error Handling

| Error | Cause | Solution | |-------|-------|----------| | ORDER BY expression not in primary key | PRIMARY KEY != ORDER BY | Remove explicit PRIMARY KEY or align | | Too many parts (300+) | Over-partitioning | Use coarser partition expression | | Cannot convert String to UInt64 | Wrong data type | Match insert types to schema | | TTL expression type mismatch | TTL on non-date column | TTL must reference DateTime column |

Resources

Next Steps

For inserting and querying data, see clickhouse-core-workflow-b.