Agent Skills: spatial-transcriptomics-tutorials-with-omicverse

Spatial transcriptomics: Visium/HD, Stereo-seq, Slide-seq preprocessing (crop, rotate, cellpose), deconvolution (Tangram, cell2location, Starfysh), clustering (GraphST, STAGATE), integration, trajectory, communication.

UncategorizedID: starlitnightly/omicverse/spatial-transcriptomics-tutorials-with-omicverse

Author

starlitnightly

https://github.com/starlitnightly View all skills

Repository

starlitnightly/omicverse

StarlitnightlyLicense: GPL-3.0

947116

Install this agent skill to your local

pnpm dlx add-skill https://github.com/starlitnightly/omicverse/spatial-transcriptomics-tutorials-with-omicverse

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