string-database

Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

protein-protein-interactionsnetwork-analysisfunctional-enrichmentsystems-biology

ovachiever

81

cobrapy

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

constraint-based-modelingflux-balance-analysissystems-biologymetabolic-engineering

ovachiever

81

reactome-database

Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.

apibioinformaticspathway-analysisenrichment-analysis

K-Dense-AI

3,233360

cobrapy

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

pythonmetabolic-pathway-analysisflux-balance-analysissystems-biology

K-Dense-AI

3,233360