citation-management
Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.
cirq
Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise modeling, and low-level circuit design. For IBM hardware use qiskit; for quantum ML with autodiff use pennylane; for physics simulations use qutip.
chembl-database
Query ChEMBL bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.
cellxgene-census
Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.
brenda-database
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.
bioservices
Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython.
nextjs-app-router
PostHog integration for Next.js App Router applications
birdmate
APM project for birdmate
vue-expert
Use when building Vue 3 applications with Composition API, Nuxt 3, Naive ui , or Quasar. Invoke for Pinia, TypeScript, PWA, Capacitor mobile apps, Vite configuration.
vue-fsd
Feature-Sliced Design architecture for Vue 3 applications. Use when structuring large-scale Vue projects with clear boundaries, scalable folder structure, and maintainable code organization.
vue3-naiveui-fsd
Senior-level Vue 3 + Naive UI + Feature-Sliced Design with TypeScript, Clean Code & SOLID principles
tailwind-v4
Tailwind CSS v4 with CSS-first configuration, @theme directive, OKLCH colors, and Vite integration. Use for modern utility-first styling with the new v4 architecture.
finishing-branch
End-of-feature workflow for development branches. Verifies tests pass, generates PR description, chooses merge strategy, cleans up worktrees, and manages branch lifecycle. Triggers on "create PR", "merge", "finishing", "branch cleanup", "ready to merge", or at end of feature work.
genesis-orchestrator
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context-protocol
Slop-prevention middleware. Run before any design or code task to gather sources, then produce a Plan Mode block before touching any file. Eliminates hardcoded colours and generic components caused by agents assuming design decisions.
skill-manager
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state-machine
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structured-logging
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system-supervisor
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systematic-debugging
Use when encountering any bug, test failure, or unexpected behaviour, before proposing any fixes. Four-phase root-cause protocol with hard 3-attempt circuit breaker. Enhances the bug-hunter agent with structured investigation. Triggers on "bug", "error", "failing", "crash", "debug", "broken", "why isn't", "not working".
tdd
Use when implementing any feature or bug fix. Hard gate — no production code without a failing test first. Applies to vitest (apps/web/) and pytest (apps/backend/). Triggers on "implement", "add feature", "fix bug", "new component", "new endpoint", or any code-writing task.
brand-ambassador
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vector-search
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verification-before-completion
Hard gate before any "Done", "Complete", or "✅" claim. Must execute verification commands and read actual output before claiming work is complete. Bans hedging language. Triggers before any completion statement, commit, PR creation, or success claim.
visual-excellence-enforcer
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xaem-theme-ui
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playwright-browser
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outcome-translator
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claude-browser
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notebooklm-second-brain
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model-currency-checker
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metrics-collector
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input-sanitisation
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idea-to-production
Plain-English pipeline from idea to production — routes user requests to the right phase and agent
health-check
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git-worktrees
Creates isolated git worktrees for feature development with automatic dependency installation, baseline test verification, and .gitignore safety checks. Extends the /minion isolation model with a formal worktree workflow. Triggers on "new feature", "isolate", "worktree", multi-session work, or when parallel development is needed.
agent-orchestrator
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execution-guardian
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evidence-verifier
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error-taxonomy
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code-output-uplift
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email-template
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document-formatting-uplift
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dispatching-parallel-agents
Use when facing 2+ independent failures or tasks that can be worked on concurrently without shared state. Groups independent failures by component (frontend/backend/database), launches concurrent agents, integrates results, then runs full test suite. Triggers on multiple independent test failures, multi-component CI failures, or parallel feature work.
diagram-uplift
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delegation-planner
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definition-of-done-builder
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data-visualisation-uplift
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data-validation
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dashboard-patterns
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