perplexity-search
A skill for performing web searches, research, and reasoning using the Perplexity API. Handles real-time web information retrieval, deep research analysis, and advanced reasoning tasks. Use when the user asks for web searches, research, or says things like "look up", "search for", "latest information", "research", or "analyze".
code-modularization-evaluator
Evaluate and improve code modularization using the Balanced Coupling Model. Analyzes coupling strength, connascence types, and distance to identify refactoring opportunities and architectural improvements. Use when reviewing code architecture, refactoring modules, or designing new systems.
prompt-improver
A skill for improving prompts by applying general LLM/agent best practices. When the user provides a prompt, this skill outputs an improved version, identifies missing information, and provides specific improvement points. Use when the user asks to "improve this prompt", "review this prompt", or "make this prompt better".
call-codex
Call codex to perform a task.
call-cursor-agent
Call cursor-agent to perform a task.
suggest-agent-rules
Suggest agent rules analyzing the session history and the current repository.
google-calendar
Accesses the Google Calendar and Tasks API. Use this skill to view or manage calendars, events, schedules, or Google tasks.
context7
A skill for retrieving the latest library documentation using Context7. Use when the user asks about how to use a library, requests code examples, or instructs to "use context7". Prevents hallucinations based on outdated training data and provides up-to-date API information.
typescript-react-reviewer
Expert code reviewer for TypeScript + React 19 applications. Use when reviewing React code, identifying anti-patterns, evaluating state management, or assessing code maintainability. Triggers: code review requests, PR reviews, React architecture evaluation, identifying code smells, TypeScript type safety checks, useEffect abuse detection, state management review.
call-claude
Call claude to perform a task.
obsidian
Integration with Obsidian vault for managing notes, tasks, and knowledge when working with Claude. Supports adding notes, creating tasks, and organizing project documentation.
managing-environments
Best practices for managing development environments including Python venv and conda. Always check environment status before installations and confirm with user before proceeding.
jupyter-notebook-analysis
Best practices for creating comprehensive Jupyter notebook data analyses with statistical rigor, outlier handling, and publication-quality visualizations
galaxy-tool-wrapping
Expert in Galaxy tool wrapper development, XML schemas, Planemo testing, and best practices for creating Galaxy tools
bioinformatics-fundamentals
Core bioinformatics concepts including SAM/BAM format, AGP genome assembly format, sequencing technologies (Hi-C, HiFi, Illumina), quality metrics, and common data processing patterns. Essential for debugging alignment, filtering, pairing issues, and AGP coordinate validation.
claude-collaboration
Best practices for using Claude Code in team environments. Covers skill management, knowledge capture, version control, and collaborative workflows.
claude-skill-management
Expert guide for managing Claude Code global skills and commands. Use when creating new skills, symlinking to projects, updating existing skills, or organizing the centralized skill repository.
token-efficiency
Token optimization best practices for cost-effective Claude Code usage. Automatically applies efficient file reading, command execution, and output handling strategies. Includes model selection guidance (Opus for learning, Sonnet for development/debugging). Prefers bash commands over reading files.
project-sharing
Prepare organized packages of project files for sharing at different levels - from summary PDFs to fully reproducible archives. Creates copies with cleaned notebooks, documentation, and appropriate file selection. After creating sharing package, all work continues in the main project directory.
galaxy-automation
BioBlend and Planemo expertise for Galaxy workflow automation. Galaxy API usage, workflow invocation, status checking, error handling, batch processing, and dataset management. Essential for any Galaxy automation project.
folder-organization
Best practices for organizing project folders, file naming conventions, and directory structure standards for research and development projects
conda-recipe
Expert in building and testing conda/bioconda recipes, including recipe creation, linting, dependency management, and debugging common build errors
galaxy-workflow-development
Expert in Galaxy workflow development, testing, and IWC best practices. Create, validate, and optimize .ga workflows following Intergalactic Workflow Commission standards.
primer-design
Create distinctive, production-grade frontend interfaces with high design quality using the primer design system and brand guidelines. Use this skill when the user asks to build web components, pages, artifacts, posters, or applications (examples include websites, landing pages, dashboards, React components, HTML/CSS layouts, or when styling/beautifying any web UI). Generates polished code and UI design that fully conforms to the primer design system.
hello-world
A simple skill that should be used to respond to a user when the enter the phrase "hello world".
astro
Skill for using Astro projects. Includes CLI commands, project structure, core config options, and adapters. Use this skill when the user needs to work with Astro or when the user mentions Astro.
multimodal-analysis
Analyze media files (PDFs, images, diagrams) that require interpretation beyond raw text. Extracts specific information or summaries from documents, describes visual content. Use for document analysis, image understanding, diagram interpretation, chart analysis, table extraction, and any media requiring visual or contextual interpretation beyond literal text extraction.
macos-developer
Expert in macOS app development using AppKit, SwiftUI for Mac, and XPC. Specializes in system extensions, menu bar apps, and deep OS integration.
penetration-tester
Expert in ethical hacking, vulnerability assessment, and offensive security testing (Web/Network/Cloud).
xlsx
Expert in automating Excel workflows using Node.js (ExcelJS, SheetJS) and Python (pandas, openpyxl).
workflow-orchestrator
Expert in designing durable, scalable workflow systems using Temporal, Camunda, and Event-Driven Architectures.
wordpress-master
Use when user needs WordPress development, theme or plugin creation, site optimization, security hardening, multisite management, or scaling WordPress from small sites to enterprise platforms.
windows-infra-admin
Expert in Windows Server, Active Directory (AD DS), Hybrid Identity (Entra ID), and PowerShell automation.
windows-app-developer
Expert in building modern Windows applications using WinUI 3, WPF, and the Windows App SDK. Specializes in MSIX packaging, XAML styling, and MVVM architecture.
websocket-engineer
Expert in real-time communication systems, including WebSockets, Socket.IO, SSE, and WebRTC.
vue-expert
Expert Vue.js developer specializing in Vue 3 Composition API, Pinia state management, and Nuxt.js framework. This agent excels at building reactive, performant web applications with modern Vue patterns, TypeScript integration, and comprehensive tooling ecosystem.
video-engineer
Expert in video processing, streaming protocols (HLS/DASH/WebRTC), and FFmpeg automation. Specializes in building scalable video infrastructure.
ux-researcher
Expert in understanding user behaviors, needs, and motivations through qualitative and quantitative research methods to drive user-centered design.
ui-designer
Use when user needs visual UI design, interface creation, component systems, design systems, interaction patterns, or accessibility-focused user interfaces.
typescript-pro
Expert TypeScript developer specializing in advanced type system features, generic programming, and type-safe application architecture. This agent excels at leveraging TypeScript 5+ features for building robust, maintainable applications with comprehensive type safety and excellent developer experience.
trend-analyst
Expert in forecasting, signal detection, and market intelligence. Specializes in time-series analysis, social listening, and predictive modeling for business trends.
powershell-ui-architect
Expert in building GUIs and TUIs with PowerShell using WinForms, WPF, and Console/TUI frameworks. Use when creating PowerShell tools with graphical or terminal interfaces. Triggers include "PowerShell GUI", "WinForms", "WPF PowerShell", "PowerShell TUI", "terminal UI", "PowerShell interface".
powershell-security-hardening
Expert in Windows security hardening and PowerShell security configuration. Specializes in securing automation, enforcing least privilege, and aligning with enterprise security baselines. Use for securing PowerShell environments and Windows systems. Triggers include "PowerShell security", "constrained language mode", "JEA", "execution policy", "security baseline", "PowerShell logging".
powershell-module-architect
Use when user needs PowerShell module design, function structure, reusable libraries, profile optimization, or cross-version compatibility across PowerShell 5.1 and PowerShell 7+.
powershell-7-expert
Expert in modern, cross-platform PowerShell Core. Specializes in Linux/macOS automation, parallel processing, REST API integration, and modern scripting patterns. Use for cross-platform automation and modern PowerShell features. Triggers include "PowerShell 7", "PowerShell Core", "pwsh", "ForEach-Object -Parallel", "cross-platform PowerShell".
powershell-5.1-expert
Expert in legacy Windows PowerShell 5.1. Specializes in WMI, ADSI, COM automation, and maintaining backward compatibility with Windows Server environments. Use for Windows-specific automation on legacy systems. Triggers include "PowerShell 5.1", "Windows PowerShell", "WMI", "ADSI", "COM object", "legacy PowerShell".
postgres-pro
Use when user needs PostgreSQL database administration, performance optimization, high availability setup, backup/recovery, or advanced PostgreSQL feature implementation.
platform-engineer
Expert in building Internal Developer Platforms (IDP), self-service infrastructure, and Golden Paths using Backstage, Crossplane, and Kubernetes.
strategic-planning
Strategic planning specialist for task breakdown, dependency management, timeline estimation, and resource allocation. Manual invocation only - expert at decomposing complex projects into manageable tasks, identifying dependencies, assessing risks, and creating actionable roadmaps. Use when starting complex projects, facing overwhelmed scope, needing structured approaches, or requiring systematic task management before implementation.
php-pro
PHP 8.2+ specialist with expertise in modern patterns, Composer ecosystem, and enterprise PHP development. Use when building PHP applications, optimizing performance, or modernizing legacy PHP code. Triggers include "PHP", "Composer", "PHP 8", "PSR", "Symfony components", "PHP performance".
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