drugbank-database
Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.
email-composer
Draft professional emails for various contexts including business, technical, and customer communication. Use when the user needs help writing emails or composing professional messages.
ena-database
Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
ensembl-database
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
error-resolver
Systematic error diagnosis and resolution using first-principle analysis. Use when encountering any error message, stack trace, or unexpected behavior. Supports replay functionality to record and reuse solutions.
esm
Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.
etetoolkit
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
excel-analysis
Analyze Excel spreadsheets, create pivot tables, generate charts, and perform data analysis. Use when analyzing Excel files, spreadsheets, tabular data, or .xlsx files.
executing-marketing-campaigns
Plans, creates, and optimizes marketing campaigns including content strategy, social media, email, and analytics. Helps develop go-to-market strategies, campaign messaging, and performance measurement.
exploratory-data-analysis
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. Automatically detects file type and generates detailed markdown reports with format-specific analysis, quality metrics, and downstream analysis recommendations. Covers chemistry, bioinformatics, microscopy, spectroscopy, proteomics, metabolomics, and general scientific data formats.
fda-database
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.
find-bugs
Find bugs, security vulnerabilities, and code quality issues in local branch changes. Use when asked to review changes, find bugs, security review, or audit code on the current branch.
fluidsim
Framework for computational fluid dynamics simulations using Python. Use when running fluid dynamics simulations including Navier-Stokes equations (2D/3D), shallow water equations, stratified flows, or when analyzing turbulence, vortex dynamics, or geophysical flows. Provides pseudospectral methods with FFT, HPC support, and comprehensive output analysis.
gene-database
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
generate-image
Generate or edit images using AI models (FLUX, Gemini). Use for general-purpose image generation including photos, illustrations, artwork, visual assets, concept art, and any image that isn't a technical diagram or schematic. For flowcharts, circuits, pathways, and technical diagrams, use the scientific-schematics skill instead.
geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.
geo-database
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
geopandas
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transformations, spatial joins, overlay operations, choropleth mapping, or any task involving reading/writing/analyzing vector geographic data. Supports PostGIS databases, interactive maps, and integration with matplotlib/folium/cartopy. Use for tasks like buffer analysis, spatial joins between datasets, dissolving boundaries, clipping data, calculating areas/distances, reprojecting coordinate systems, creating maps, or converting between spatial file formats.
get-available-resources
This skill should be used at the start of any computationally intensive scientific task to detect and report available system resources (CPU cores, GPUs, memory, disk space). It creates a JSON file with resource information and strategic recommendations that inform computational approach decisions such as whether to use parallel processing (joblib, multiprocessing), out-of-core computing (Dask, Zarr), GPU acceleration (PyTorch, JAX), or memory-efficient strategies. Use this skill before running analyses, training models, processing large datasets, or any task where resource constraints matter.
gget
CLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases: gene info (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, genome downloads. For advanced BLAST/batch processing, use biopython. For multi-database integration, use bioservices.
gh-address-comments
Help address review/issue comments on the open GitHub PR for the current branch using gh CLI; verify gh auth first and prompt the user to authenticate if not logged in.
shirushi
Document ID management for Git repositories. Validates, assigns, and tracks immutable doc_ids across Markdown/YAML files. Use when working with doc_id, document IDs, "@see docid" references, document integrity validation, or shirushi commands.
how-to-create-claude-code-skill
A guide to creating Claude Code Skills.
first-alien-encounter
神秘接触 - Stella终于与盖亚星球的智慧生命面对面接触,一次改变一切的遭遇
finding-shelter
寻找庇护所 - 帮助Stella在盖亚星球度过第一个夜晚,寻找或建造安全的临时住所
exploring-ancient-ruins
古代遗迹 - Stella深入探索盖亚星球的古代文明遗迹,解开失落文明的秘密
emergency-distress-signal
紧急求救 - 飞船坠毁后与Stella的首次联系,帮助她评估损伤并制定初步生存计划
daily-science-routine
日常科研 - Stella建立临时研究站,进行系统的科学观察和实验,享受科学家的日常
cave-exploration
洞穴探险 - Stella发现一个深邃的洞穴系统,深入探索发现bioluminescent晶体、地下水源和神秘的古老痕迹
claude-opus-4-5-migration
Migrate prompts and code from Claude Sonnet 4.0, Sonnet 4.5, or Opus 4.1 to Opus 4.5. Use when the user wants to update their codebase, prompts, or API calls to use Opus 4.5. Handles model string updates and prompt adjustments for known Opus 4.5 behavioral differences. Does NOT migrate Haiku 4.5.
context-save
当用户发送"换窗口处理-"时调用。总结当前窗口的上下文信息、已完成任务、未完成任务,保存到 docs/context-sessions/ 目录,便于新窗口恢复。
context-resume
恢复之前保存的会话上下文。列出所有待处理的 session,读取选定 session 的任务信息,更新进度,任务全部完成后删除文件。
stockfish-analyzer
国际象棋引擎分析工具,提供最佳走法推荐、局面评估和多种走法选择分析。支持FEN字符串直接输入分析。
python-sandbox
在沙盒环境中执行Python代码,用于数据分析、可视化和生成Excel、Word、PDF等文件。支持数据清洗、统计分析、机器学习、图表生成、文档自动化等复杂工作流。
glm4v-analyze-image
智谱AI的视觉语言模型,用于图像分析、内容识别和视觉问答
firecrawl
多功能网页抓取和数据提取工具,支持同步抓取、搜索、网站地图获取和异步爬取
crawl4ai
功能强大的开源网页抓取和数据处理工具,支持6种工作模式,包括截图、PDF导出和智能爬取
web-styling
Styling patterns for React web applications. Use when working with Tailwind CSS, CSS Modules, theming, responsive design, or component styling.
web-navigation
Navigation and routing patterns for React web applications. Use when implementing React Router, Next.js routing, deep links, or handling navigation state.
web-build-deploy
Building and deploying React web applications. Use when configuring builds, deploying to Vercel/Netlify, setting up CI/CD, Docker, or managing environments.
web-auth
Authentication patterns for React web applications. Use when implementing login flows, OAuth, JWT handling, session management, or protected routes in React web apps.
rn-zustand-patterns
Zustand state management patterns for React Native. Use when working with Zustand stores, debugging state timing issues, or implementing async actions in Zustand.
rn-testing
Testing patterns for React Native with Jest and React Native Testing Library. Use when writing tests, mocking Expo modules, testing Zustand stores, or debugging test failures.
rn-styling
Styling patterns for React Native with NativeWind and BrandColors. Use when working with styles, themes, colors, responsive layouts, or platform-specific UI in Expo/React Native.
rn-state-flows
Complex multi-step operations in React Native. Use when implementing flows with multiple async steps, state machine patterns, or debugging flow ordering issues.
rn-performance
Performance optimization for React Native. Use when optimizing lists, preventing re-renders, memoizing components, or debugging performance issues in Expo/React Native apps.
rn-observability
Logging, error messages, and debugging patterns for React Native. Use when adding logging, designing error messages, debugging production issues, or improving code observability.
rn-navigation
Expo Router navigation patterns for React Native. Use when implementing navigation, routing, deep links, tab bars, modals, or handling navigation state in Expo apps.
rn-native-features
Native iOS features in Expo React Native apps. Use when implementing camera, push notifications, haptics, permissions, device sensors, or other native APIs in Expo.
rn-auth
React Native authentication patterns for Expo apps. Use when implementing login flows, Google/Apple sign-in, token management, session handling, or debugging auth issues in Expo/React Native.
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