assembly-index
Lee Cronin's Assembly Theory for molecular complexity measurement and life detection via assembly index computation.
assets
Assets skill
astropy
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.
atheris
Python fuzzing with Atheris for discovering vulnerabilities in Python code.
atproto-ingest
Layer 1 - Data Acquisition for Bluesky/AT Protocol social graph and content.
attractor
Invariant set attracting nearby trajectories
audit-context-building
Enables ultra-granular, line-by-line code analysis to build deep architectural context before vulnerability or bug finding.
auditing-aws-s3-bucket-permissions
>
auditing-azure-active-directory-configuration
>
auditing-cloud-with-cis-benchmarks
>
auditing-gcp-iam-permissions
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auditing-kubernetes-cluster-rbac
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auditing-terraform-infrastructure-for-security
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auditing-tls-certificate-transparency-logs
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audit-orchestrator
Audit Orchestrator
audit-prep-assistant
Prepare your codebase for security review using Trail of Bits' checklist. Helps set review goals, runs static analysis tools, increases test coverage, removes dead code, ensures accessibility, and generates comprehensive documentation (flowcharts, user stories, inline comments). (project, gitignored)
automating-ioc-enrichment
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autopoiesis
Self-producing skill system combining ruler enforcement with skill self-evolution. Implements trifurcation-first imperative via nbb sexp invocation for idempotent agent instruction.
aws-architecture-design
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aws-sso-auth-guide
AWS SSO discovery, configuration, and terminal usage
azure-devops
Interact with Azure DevOps repositories, pull requests, and APIs using the AZURE_DEVOPS_TOKEN environment variable. Use when working with code hosted on Azure DevOps or managing Azure DevOps resources.
b
World B Skill
b01bab
Gay MCP skill at invocation 2
b42fb4
Gay MCP skill at invocation 19
babashka
Clojure scripting without JVM startup.
babashka-clj
Babashka scripting for fast Clojure execution. JVM-less scripting with GraalVM native compilation and sci interpreter.
backend-development
Backend API design, database architecture, microservices patterns, and
bafishka
🐟 Rust-native Fish shell-friendly file operations with Steel-backed SCI
bci-colored-operad
Brain-Computer Interface with colored operad security boundaries. Maximally isolated EEG/neural data processing via VM→Container→Process enclosure with GF(3) conservation for Agent-O-Rama neural pathways.
bdd-mathematical-verification
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beacon-repeater
MLX↔JAX bidirectional beacon-repeater with spectral gap random walk,
beads-issue-tracker
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beeper
Unified messaging via three access tiers — MCP (live API), beeper-cli (authenticated CLI), and direct SQLite→DuckDB (full archive). Search, analyze, and act across all networks. Subsumes beeper-mcp, messaging-world, and signal-messaging.
beeper-mcp
Unified messaging via Beeper Desktop MCP. Search chats, send messages, manage conversations across all networks (iMessage, WhatsApp, Signal, Telegram, Discord, Slack, etc.)
behaviour-surprisal-analysis
Behaviour Surprisal Analysis
benchling-integration
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
bidirectional-lens-logic
Hedges' 4-kind lattice for bidirectional programming - covariant/contravariant/invariant/bivariant types with GF(3) correspondence
bidirectional-navigator
Safe proof ↔ theorem navigation with non-backtracking constraint.
bifunctor-bridge
Bifunctors: two-argument functors for product categories.
bifurcation
Hopf bifurcation detection for dynamical system state transitions with GF(3) phase portraits
bifurcation-generator
Generate bifurcation diagrams for dynamical systems. Use when visualizing parameter-dependent behavior transitions.
bigquery
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bigquery-asi-interleave
Interleave layer bridging the BigQuery cluster to plurigrid/asi. Routes BigQuery queries through asi's DuckDB stack, wires patent search into asi knowledge graph, connects Looker Studio dashboards to CatColab, and feeds BigQuery ML into the lolita physics emulation pipeline.
binary-triage
Performs initial binary triage by surveying memory layout, strings, imports/exports, and functions to quickly understand what a binary does and identify suspicious behavior. Use when first examining a binary, when user asks to triage/survey/analyze a program, or wants an overview before deeper reverse engineering.
biomni
Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use this skill when conducting multi-step biomedical research including CRISPR screening design, single-cell RNA-seq analysis, ADMET prediction, GWAS interpretation, rare disease diagnosis, or lab protocol optimization. Leverages LLM reasoning with code execution and integrated biomedical databases.
biopython
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.
biorxiv-database
Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
bioservices
Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database).
birkhoff-average
Time average of observable along trajectory
bisimulation-game
Bisimulation game for resilient skill dispersal across AI agents with GF(3) conservation and observational bridge types.
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