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davila7

davila7

801 Skills published on GitHub.

string-database

Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

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sympy

Use this skill when working with symbolic mathematics in Python. This skill should be used for symbolic computation tasks including solving equations algebraically, performing calculus operations (derivatives, integrals, limits), manipulating algebraic expressions, working with matrices symbolically, physics calculations, number theory problems, geometry computations, and generating executable code from mathematical expressions. Apply this skill when the user needs exact symbolic results rather than numerical approximations, or when working with mathematical formulas that contain variables and parameters.

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torch-geometric

Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning.

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torchdrug

Graph-based drug discovery toolkit. Molecular property prediction (ADMET), protein modeling, knowledge graph reasoning, molecular generation, retrosynthesis, GNNs (GIN, GAT, SchNet), 40+ datasets, for PyTorch-based ML on molecules, proteins, and biomedical graphs.

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transformers

This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks. Use for text generation, classification, question answering, translation, summarization, image classification, object detection, speech recognition, and fine-tuning models on custom datasets.

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treatment-plans

Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management. Includes SMART goal frameworks, evidence-based interventions with minimal text citations, regulatory compliance (HIPAA), and professional formatting. Prioritizes brevity and clinical actionability.

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umap-learn

UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for high-dimensional data.

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uniprot-database

Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniProt-specific control.

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uspto-database

Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

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vaex

Use this skill for processing and analyzing large tabular datasets (billions of rows) that exceed available RAM. Vaex excels at out-of-core DataFrame operations, lazy evaluation, fast aggregations, efficient visualization of big data, and machine learning on large datasets. Apply when users need to work with large CSV/HDF5/Arrow/Parquet files, perform fast statistics on massive datasets, create visualizations of big data, or build ML pipelines that don't fit in memory.

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venue-templates

Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and grant proposals (NSF, NIH, DOE, DARPA). This skill should be used when preparing manuscripts for journal submission, conference papers, research posters, or grant proposals and need venue-specific formatting requirements and templates.

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zarr-python

Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.

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zinc-database

Access ZINC (230M+ purchasable compounds). Search by ZINC ID/SMILES, similarity searches, 3D-ready structures for docking, analog discovery, for virtual screening and drug discovery.

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api-security-best-practices

Implement secure API design patterns including authentication, authorization, input validation, rate limiting, and protection against common API vulnerabilities

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api-security-testing

API security testing workflow for REST and GraphQL APIs covering authentication, authorization, rate limiting, input validation, and security best practices.

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file-uploads

Expert at handling file uploads and cloud storage. Covers S3, Cloudflare R2, presigned URLs, multipart uploads, and image optimization. Knows how to handle large files without blocking. Use when: file upload, S3, R2, presigned URL, multipart.

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google-cloud-auth

Provides expert guidance on authenticating and authorizing to Google Cloud services and APIs, covering human users, service identities, Application Default Credentials (ADC), and best practices for secure access.

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google-cloud-waf-security

Generates security-focused guidance for Google Cloud workloads based on the Google Cloud Well-Architected Framework (WAF). Use to evaluate a workload, identify security requirements, and provide actionable recommendations for IAM, network security, data protection, and operational security.

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red-team-tactics

Red team tactics principles based on MITRE ATT&CK. Attack phases, detection evasion, reporting.

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sast-configuration

Static Application Security Testing (SAST) tool setup, configuration, and custom rule creation for comprehensive security scanning across multiple programming languages.

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secrets-management

Secure secrets management practices for CI/CD pipelines using Vault, AWS Secrets Manager, and other tools.

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security-audit

Comprehensive security auditing workflow covering web application testing, API security, penetration testing, vulnerability scanning, and security hardening.

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security-best-practices

Perform language and framework specific security best-practice reviews and suggest improvements. Trigger only when the user explicitly requests security best practices guidance, a security review/report, or secure-by-default coding help. Trigger only for supported languages (python, javascript/typescript, go). Do not trigger for general code review, debugging, or non-security tasks.

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security-ownership-map

Analyze git repositories to build a security ownership topology (people-to-file), compute bus factor and sensitive-code ownership, and export CSV/JSON for graph databases and visualization. Trigger only when the user explicitly wants a security-oriented ownership or bus-factor analysis grounded in git history (for example: orphaned sensitive code, security maintainers, CODEOWNERS reality checks for risk, sensitive hotspots, or ownership clusters). Do not trigger for general maintainer lists or non-security ownership questions.

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security-threat-model

Repository-grounded threat modeling that enumerates trust boundaries, assets, attacker capabilities, abuse paths, and mitigations, and writes a concise Markdown threat model. Trigger only when the user explicitly asks to threat model a codebase or path, enumerate threats/abuse paths, or perform AppSec threat modeling. Do not trigger for general architecture summaries, code review, or non-security design work.

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threat-modeling-expert

Expert in threat modeling methodologies, security architecture review, and risk assessment. Masters STRIDE, PASTA, attack trees, and security requirement extraction. Use PROACTIVELY for security architecture reviews, threat identification, or building secure-by-design systems.

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vulnerability-scanner

Advanced vulnerability analysis principles. OWASP 2025, Supply Chain Security, attack surface mapping, risk prioritization.

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web-security-testing

Web application security testing workflow for OWASP Top 10 vulnerabilities including injection, XSS, authentication flaws, and access control issues.

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code-review

Perform code reviews following Sentry engineering practices. Use when reviewing pull requests, examining code changes, or providing feedback on code quality. Covers security, performance, testing, and design review.

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commit

Create commit messages following Sentry conventions. Use when committing code changes, writing commit messages, or formatting git history. Follows conventional commits with Sentry-specific issue references.

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create-pr

Create pull requests following Sentry conventions. Use when opening PRs, writing PR descriptions, or preparing changes for review. Follows Sentry's code review guidelines.

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deslop

Remove AI-generated code slop from a branch. Use when cleaning up AI-generated code, removing unnecessary comments, defensive checks, or type casts. Checks diff against main and fixes style inconsistencies.

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find-bugs

Find bugs, security vulnerabilities, and code quality issues in local branch changes. Use when asked to review changes, find bugs, security review, or audit code on the current branch.

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iterate-pr

Iterate on a PR until CI passes. Use when you need to fix CI failures, address review feedback, or continuously push fixes until all checks are green. Automates the feedback-fix-push-wait cycle.

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footballbin-predictions

Get AI-powered match predictions for Premier League and Champions League including scores, next goal, and corners.

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browser-automation

Browser automation powers web testing, scraping, and AI agent interactions. The difference between a flaky script and a reliable system comes down to understanding selectors, waiting strategies, and anti-detection patterns. This skill covers Playwright (recommended) and Puppeteer, with patterns for testing, scraping, and agentic browser control. Key insight: Playwright won the framework war. Unless you need Puppeteer's stealth ecosystem or are Chrome-only, Playwright is the better choice in 202

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browser-extension-builder

Expert in building browser extensions that solve real problems - Chrome, Firefox, and cross-browser extensions. Covers extension architecture, manifest v3, content scripts, popup UIs, monetization strategies, and Chrome Web Store publishing. Use when: browser extension, chrome extension, firefox addon, extension, manifest v3.

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busybox-on-windows

How to use a Win32 build of BusyBox to run many of the standard UNIX command line tools on Windows.

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cf-crawl

Crawl entire websites using Cloudflare Browser Rendering /crawl API. Initiates async crawl jobs, polls for completion, and saves results as markdown files. Useful for ingesting documentation sites, knowledge bases, or any web content into your project context. Requires CLOUDFLARE_ACCOUNT_ID and CLOUDFLARE_API_TOKEN environment variables.

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domain-name-brainstormer

Generates creative domain name ideas for your project and checks availability across multiple TLDs (.com, .io, .dev, .ai, etc.). Saves hours of brainstorming and manual checking.

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geo-fundamentals

Generative Engine Optimization for AI search engines (ChatGPT, Claude, Perplexity).

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playwright-skill

Complete browser automation with Playwright. Auto-detects dev servers, writes clean test scripts to /tmp. Test pages, fill forms, take screenshots, check responsive design, validate UX, test login flows, check links, automate any browser task. Use when user wants to test websites, automate browser interactions, validate web functionality, or perform any browser-based testing.

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skill-share

A skill that creates new Claude skills and automatically shares them on Slack using Rube for seamless team collaboration and skill discovery.

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template-skill

Replace with description of the skill and when Claude should use it.

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manim

Comprehensive guide for Manim Community - Python framework for creating mathematical animations and educational videos with programmatic control

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motion-canvas

Complete production-ready guide for Motion Canvas with ESM/CommonJS workarounds, full setup templates, and troubleshooting for programmatic video creation using TypeScript

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remotion

Best practices and comprehensive guide for Remotion - programmatic video creation in React with animations, compositions, and media handling

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sora

Use when the user asks to generate, remix, poll, list, download, or delete Sora videos via OpenAI\u2019s video API using the bundled CLI (`scripts/sora.py`), including requests like \u201cgenerate AI video,\u201d \u201cSora,\u201d \u201cvideo remix,\u201d \u201cdownload video/thumbnail/spritesheet,\u201d and batch video generation; requires `OPENAI_API_KEY` and Sora API access.

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bright-data-best-practices

Build production-ready Bright Data integrations with best practices baked in. Reference documentation for developers using coding assistants (Claude Code, Cursor, etc.) to implement web scraping, search, browser automation, and structured data extraction. Covers Web Unlocker API, SERP API, Web Scraper API, and Browser API (Scraping Browser).

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bright-data-mcp

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