Back to authors
ovachiever

ovachiever

371 Skills published on GitHub.

exploratory-data-analysis

Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. Automatically detects file type and generates detailed markdown reports with format-specific analysis, quality metrics, and downstream analysis recommendations. Covers chemistry, bioinformatics, microscopy, spectroscopy, proteomics, metabolomics, and general scientific data formats.

exploratory-data-analysisscientific-datadata-qualityformat-detectionmarkdown-reporting
analyticsView skill →

geniml

This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.

genomic-intervalsbed-filesmachine-learningchromatin-accessibilitysingle-cell-atac-seq
bioinformaticsView skill →

optimizing-attention-flash

Optimizes transformer attention with Flash Attention for 2-4x speedup and 10-20x memory reduction. Use when training/running transformers with long sequences (>512 tokens), encountering GPU memory issues with attention, or need faster inference. Supports PyTorch native SDPA, flash-attn library, H100 FP8, and sliding window attention.

transformersflash-attentionpytorchgpu-memory-optimizationlong-sequence-processing
performance-tuningView skill →

fastmcp

|

fastmcp
unspecifiedView skill →

faiss

Facebook's library for efficient similarity search and clustering of dense vectors. Supports billions of vectors, GPU acceleration, and various index types (Flat, IVF, HNSW). Use for fast k-NN search, large-scale vector retrieval, or when you need pure similarity search without metadata. Best for high-performance applications.

similarity-searchvector-retrievalgpu-accelerationknnindexing
machine-learningView skill →

gene-database

Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.

gene-queryNCBIE-utilitiesDatasets-APIfunctional-analysis
bioinformaticsView skill →

file-organizer

Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.

file-organizationautomationduplicate-detectioncleanupdigital-workspace
workflowView skill →

fda-consultant-specialist

Senior FDA consultant and specialist for medical device companies including HIPAA compliance and requirement management. Provides FDA pathway expertise, QSR compliance, cybersecurity guidance, and regulatory submission support. Use for FDA submission planning, QSR compliance assessments, HIPAA evaluations, and FDA regulatory strategy development.

fdamedical-deviceHIPAA-complianceregulatory-complianceQSR-compliance
consultingView skill →

frontend-design

Create distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, or applications. Generates creative, polished code that avoids generic AI aesthetics.

frontendweb-developmenthtml-cssresponsive-designui-components
uiView skill →

gdpr-dsgvo-expert

Senior GDPR/DSGVO expert and internal/external auditor for data protection compliance. Provides EU GDPR and German DSGVO expertise, privacy impact assessments, data protection auditing, and compliance verification. Use for GDPR compliance assessments, privacy audits, data protection planning, and regulatory compliance verification.

GDPRDSGVOdata-protectioncomplianceaudit
privacyView skill →

geo-database

Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.

ncbigene-expressiongenomicsmicroarrayrna-seq
bioinformaticsView skill →

video-downloader

Downloads videos from YouTube and other platforms for offline viewing, editing, or archival. Handles various formats and quality options.

video-downloadoffline-accessformat-supportquality-optionsyoutube
video-contentView skill →

grpo-rl-training

Expert guidance for GRPO/RL fine-tuning with TRL for reasoning and task-specific model training

reinforcement-learningfine-tuningtransformerstrlmodel-training
ml-developmentView skill →

github-project-automation

|

githubautomationci-cdtask-automationproject-management
workflowView skill →

gwas-database

Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.

gwasgenetic-epidemiologypolygenic-risk-scoresnhgri-ebivariant-query
bioinformaticsView skill →

git-commit-helper

Generate conventional commit messages automatically. Use when user runs git commit, stages changes, or asks for commit message help. Analyzes git diff to create clear, descriptive conventional commit messages. Triggers on git commit, staged changes, commit message requests.

gitcommit-messagecommitlintconventional-commitsautomation
ciView skill →

gptq

Post-training 4-bit quantization for LLMs with minimal accuracy loss. Use for deploying large models (70B, 405B) on consumer GPUs, when you need 4× memory reduction with <2% perplexity degradation, or for faster inference (3-4× speedup) vs FP16. Integrates with transformers and PEFT for QLoRA fine-tuning.

model-compressionquantizationtransformersinference-optimizationgpu
deploymentView skill →

hono-routing

|

honoroutingnodejsapimiddleware
backendView skill →

Page 8 of 21 · 371 results