table-filler
Fill `outline/tables_index.md` from `outline/table_schema.md` + evidence packs (NO PROSE in cells; citation-backed rows).
table-schema
Define evidence-first table schemas for a survey: what each table must answer, row unit, columns, and which evidence-pack fields are required to fill it.
thesis-compile-review
对中文毕业论文进行编译、warning 分级、模板模式检查、数据与引用复查，并把问题回写成可继续迭代的 review checklist。
appendix-table-writer
Curate reader-facing survey tables for the Appendix (clean layout + high information density), using only in-scope evidence and existing citation keys.
argument-selfloop
Build a final, machine-readable argument snapshot from current H3 sections and refresh section fingerprints before merge.
artifact-contract-auditor
Audit one research Workspace for declared Unit outputs and Pipeline target Artifacts, writing `output/CONTRACT_REPORT.md`; use for mid-Run coverage snapshots or final delivery completeness, not deep provenance integrity.
arxiv-search
Retrieve arXiv paper metadata with keyword queries or import an offline arXiv export, and save results as JSONL (`papers/papers_raw.jsonl`).
beamer-compile-qa
Compile the Beamer tutorial deck and write a build report.
beamer-scaffold
Generate a Beamer slide deck from the final tutorial and approved module structure.
bias-assessor
Use when `evidence-review` has an extraction table and needs lightweight risk-of-bias fields.
chapter-briefs
Build per-chapter (H2) writing briefs (NO PROSE) so the final survey reads like a paper (chapter leads + cross-H3 coherence) without inflating the ToC.
chapter-lead-writer
Write H2 chapter lead blocks (`sections/S<sec_id>_lead.md`) that preview the chapter's comparison lens and connect its H3 subsections, without adding new facts.
chapter-skeleton
Build a retrieval-informed chapter skeleton (`outline/chapter_skeleton.yml`) from taxonomy/core scope before stable H3 decomposition.
checkpoint-brief
Project completed stage Artifacts into a concise human-review block in `DECISIONS.md`; use before a Workflow checkpoint, not for Workflow routing or approval.
citation-anchoring
Regression-check citation anchoring (citations stay in the same subsection) to prevent “polish drift” that breaks claim→evidence alignment.
citation-diversifier
PRODUCES a citation-budget plan/report (`output/CITATION_BUDGET_REPORT.md`); does NOT edit the draft. Allocates an in-scope per-H3 budget (NO NEW FACTS) so drafts stop failing the global unique-citation gate; citation-injector applies it.
citation-injector
APPLIES/consumes a `citation-diversifier` budget report (`output/CITATION_BUDGET_REPORT.md`) to inject *in-scope* citations into an existing draft (NO NEW FACTS), so the run passes the global unique-citation gate without citation dumps.
citation-verifier
Generate and verify BibTeX entries from paper notes, writing `citations/ref.bib` and `citations/verified.jsonl`.
claim-evidence-matrix
Seed `outline/claim_evidence_matrix.md` from outline+notes; claim-matrix-rewriter rewrites it later from evidence packs.
claim-matrix-rewriter
Rewrite `outline/claim_evidence_matrix.md` as a projection/index of evidence packs (NO PROSE), so claims/axes are driven by `outline/evidence_drafts.jsonl` rather than outline placeholders.
claims-extractor
Use when a review workspace has manuscript text and needs a traceable claim ledger.
concept-graph
Use when an approved tutorial spec exists and the run needs a deterministic prerequisite graph before module planning.
dedupe-rank
Use when a broad paper candidate pool needs deterministic deduplication and a stable core set.
deliverable-selfloop
Score an existing reader-facing deliverable and emit a deterministic PASS/FAIL scorecard plus bounded repair plan; use after synthesis, not to rewrite content.
evidence-binder
Bind addressable evidence IDs from `papers/evidence_bank.jsonl` to each subsection (H3), producing `outline/evidence_bindings.jsonl`.
evidence-draft
Create per-subsection evidence packs (NO PROSE): claim candidates, concrete comparisons, evaluation protocol, limitations, plus citation-backed evidence snippets with provenance.
evidence-selfloop
Evidence self-loop for surveys: read evidence bindings + evidence packs, then write an actionable upstream TODO plan (which stage/skill to fix) before writing more prose.
exercise-builder
Use when a tutorial module plan exists but each module still needs a verifiable teaching loop.
extraction-form
Use when `evidence-review` has screened includes and needs a schema-aligned extraction table.
front-matter-writer
Write the survey's front matter files (Abstract, Introduction, Related Work, Discussion, Conclusion) in paper voice, with high citation density and a single evidence-policy paragraph.
global-reviewer
Global consistency review for survey drafts: terminology, cross-section coherence, and scope/citation hygiene.
grad-paragraph
Write one survey-quality paragraph from evidence packs (tension → contrast → evaluation anchor → limitation).
human-checkpoint
Review and record one pending human checkpoint in a research Workspace; use when a HUMAN Unit is blocked on an `Approve C*` decision, and never treat silence or artifact existence as approval.
idea-brief
Lock an ideation run into a single-source-of-truth brainstorm brief (`output/trace/IDEA_BRIEF.md`) and a replayable multi-query plan (`queries.md`).
idea-direction-generator
Generate a compact pool of discussion-worthy research directions from the signal table, writing `output/trace/IDEA_DIRECTION_POOL.md`.
idea-memo-writer
Synthesize the shortlist into a discussion-ready research idea brainstorm memo, writing `output/REPORT.md`, `output/APPENDIX.md`, and `output/REPORT.json`.
idea-screener
Screen the direction pool with a discussion-first scoring pass, writing `output/trace/IDEA_SCREENING_TABLE.md`.
idea-shortlist-curator
Converge the screened direction pool into a small, discussion-ready shortlist, writing `output/trace/IDEA_SHORTLIST.md`.
idea-signal-mapper
Map paper notes + taxonomy into a signal table of tensions, missing pieces, and promising academic axes for brainstorm discussion. Writes `output/trace/IDEA_SIGNAL_TABLE.md`.
keyword-expansion
Expand and refine search keywords (synonyms, acronyms, exclusions) and update `queries.md`.
latex-compile-qa
Compile a LaTeX project and run basic QA (missing refs, bib errors, broken citations), producing `latex/main.pdf` and a build report.
module-source-coverage
Use when a tutorial module plan exists and the run needs an auditable module-to-source grounding file before prose.
source-ingest
Fetch and normalize supported source-tutorial inputs into local, traceable text artifacts.
source-manifest
Build or validate the source manifest for the source-tutorial pipeline from user-provided URLs/files.
source-tutorial-spec
Use when a `source-tutorial` workspace has ingested sources and needs a grounded tutorial contract before structure planning.
source-tutorial-writer
Use when approved tutorial context packs exist and the run needs the final article-first tutorial deliverable.
survey-visuals
Draft non-prose visuals artifacts (timeline, figure specs) for a survey, grounded in evidence and using citation keys from `citations/ref.bib`.
synthesis-writer
Use when `evidence-review` has completed extraction and needs a bounded narrative synthesis.
taxonomy-builder
Build a 2+ level taxonomy (`outline/taxonomy.yml`) from a core paper set and scope constraints, with short descriptions per node.
terminology-normalizer
Normalize terminology across a draft (canonical terms + synonym policy) without changing citations or meaning.
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