single-trajectory-analysis
Trajectory & RNA velocity: PAGA, Palantir, VIA, dynamo, scVelo, latentvelo, graphvelo backends via ov.single.Velo. Pseudotime, stream plots.
spatial-transcriptomics-tutorials-with-omicverse
Spatial transcriptomics: Visium/HD, Stereo-seq, Slide-seq preprocessing (crop, rotate, cellpose), deconvolution (Tangram, cell2location, Starfysh), clustering (GraphST, STAGATE), integration, trajectory, communication.
tcga-bulk-data-preprocessing-with-omicverse
TCGA bulk RNA-seq preprocessing with pyTCGA: GDC sample sheets, expression archives, clinical metadata, Kaplan-Meier survival analysis, and annotated AnnData export.
sdlc-ceo-review
CEO/创始人视角的计划审视。重新思考问题,找出10星产品,挑战前提假设,在创造更好产品时扩展范围。四种模式:范围扩展、选择性扩展、保持范围、范围缩减。
sdlc-qa-browse
快速无头浏览器,用于 QA 测试和站点验证。导航任意 URL,与元素交互,验证页面状态,对比操作前后差异,截取带注释的截图,检查响应式布局,测试表单和上传。
sdlc-qa-report
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sdlc-retro
周度工程复盘。分析提交历史、工作模式和代码质量指标,支持团队感知,识别当前用户,分析每个贡献者的优点和成长空间。
ui-ux-pro-max
UI/UX design intelligence. 50 styles, 21 palettes, 50 font pairings, 20 charts, 8 stacks (React, Next.js, Vue, Svelte, SwiftUI, React Native, Flutter, Tailwind). Actions: plan, build, create, design, implement, review, fix, improve, optimize, enhance, refactor, check UI/UX code. Projects: website, landing page, dashboard, admin panel, e-commerce, SaaS, portfolio, blog, mobile app, .html, .tsx, .vue, .svelte. Elements: button, modal, navbar, sidebar, card, table, form, chart. Styles: glassmorphism, claymorphism, minimalism, brutalism, neumorphism, bento grid, dark mode, responsive, skeuomorphism, flat design. Topics: color palette, accessibility, animation, layout, typography, font pairing, spacing, hover, shadow, gradient.
requirements-analysis
分析业务需求并创建完整的软件需求规格说明书。在项目启动、新增功能或需求变更时使用。该技能会引导你完成需求收集、分析和文档化过程,确保需求清晰、完整且可验证。
product-design
设计产品线框图、用户流程和交互原型。在需求分析后、UI 开发前使用。该技能会创建产品线框图(HTML/SVG 格式)、用户流程图和交互原型规格,确保产品设计符合用户体验最佳实践。
create-viral-content
Create viral content for social media: Reddit posts, Twitter threads, LinkedIn, YouTube, TikTok, blogs. Use when: user wants content to go viral, be engaging, attention-grabbing, or generate engagement.
questionably-ultrathink-skill
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questionably-ultrathink
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peer-review
Systematic peer review and self-evaluation toolkit. Evaluate methodology, statistics, experimental design, reproducibility, ethics, and reporting standards. Use during the REVIEW phase to assess manuscript quality before submission, or when reviewing others' work.
plan-week
Create a focused weekly plan based on tasks, priorities, and your work patterns. Use when the user types /plan_week, after a weekly review, at the start of a new week, or when feeling overwhelmed by options.
quarterly-review
Conduct a quarterly review of your overall research mission and direction. This is a user-level review stored in ~/.researchAssistant/. Use when the user types /quarterly_review, every 3 months, after major project milestones, or when questioning research direction.
review-script
Review a script for documentation quality, code standards, and reproducibility. Helps ensure code is ready for the methods section. Use when the user types /review_script, after writing a new script, before writing methods, or when passive checks flag undocumented scripts.
scientific-visualization
Create publication-quality scientific figures with matplotlib, seaborn, and plotly. Includes multi-panel layouts, error bars, significance markers, colorblind-safe palettes, and journal-specific export (PDF/EPS/TIFF). Use when creating figures for manuscripts, presentations, or any research visualization.
scientific-writing
Write scientific manuscripts with proper structure (IMRAD), citations (APA/AMA/Vancouver), figures/tables, and reporting guidelines (CONSORT/STROBE/PRISMA). Use when drafting any manuscript section, improving writing clarity, or preparing for journal submission.
statistical-analysis
Comprehensive statistical analysis toolkit for research. Conduct hypothesis tests (t-test, ANOVA, chi-square), regression, correlation, Bayesian stats, power analysis, assumption checks, and APA reporting. Use when the user asks about statistics, needs help analyzing data, or when writing methods sections that include statistical approaches.
summarize-meeting
Extract action items, decisions, and key points from meeting transcripts. Automatically routes items to tasks.md or GitHub Issues based on complexity. Use when the user types /summarize_meeting or after running /transcribe.
task
Rapid task capture without breaking flow. Use when the user types /task or wants to quickly add a todo item to tasks.md. Supports priority flags (!high, !low). Use this instead of /note for action items.
transcribe
Transcribe audio files from meetings into text documents using Whisper. Use when the user types /transcribe, has a new audio recording, or when RA detects new audio files in meetings/audio/. Supports speaker diarization with pyannote.
weekly-review
Conduct a weekly review of project progress and plan for the upcoming week. Use when the user types /weekly_review, when it's Monday and no review exists for this week, or at the end of the work week. Aggregates daily activity entries and identifies patterns.
wrap-up
End-of-day command to capture what happened, consolidate notes, and set up for tomorrow. Use when the user types /wrap_up, says "end of day", "wrapping up", or "done for the day". Gathers git activity, integrates /note entries, and creates a daily summary in activity.md.
write-background
Draft or update the background/introduction section based on literature in .research/literature/. Use when the user types /write_background, after completing literature review, or when background.md is empty but literature files exist.
write-methods
Generate or update the methods section based on actual scripts in the pipeline. Links code directly to reproducible documentation. Use when the user types /write_methods, after completing scripts, when methods.md is out of sync with code, or before writing results.
write-results
Draft the results section from figures and their captions. Builds a coherent narrative from visual evidence. Use when the user types /write_results, when figures exist with captions, or after methods section is complete.
deep-research
Conduct a thorough literature search on a topic with verified citations. Use when the user types /deep_research, asks to "research a topic", "find papers on", or needs literature review. CRITICAL - Never fabricate citations. Every claim must have a verifiable source.
exploratory-data-analysis
Perform comprehensive exploratory data analysis on research data. Automatically analyze data structure, quality, distributions, and generate insights. Use when the user provides a dataset, asks to "explore data", "analyze this file", or needs to understand their data before formal analysis.
hypothesis-generation
Generate testable scientific hypotheses from observations, data, or research questions. Develop competing explanations, design experiments, and formulate predictions. Use during the PLANNING phase or when developing research aims.
literature-review
Conduct comprehensive, systematic literature reviews using multiple databases (PubMed, bioRxiv, Semantic Scholar, OpenAlex). Creates documented searches, synthesizes findings thematically, verifies citations, and generates professional markdown reports with multiple citation styles (APA, Nature, Vancouver). Use when the user needs thorough literature research or types /deep_research.
monthly-review
Conduct a monthly review of project alignment and progress toward aims. Use when the user types /monthly_review, at the start of a new month, after completing a major milestone, or when uncertain about project direction.
next
Assess current project state and suggest the most valuable next action. The primary entry point for users who aren't sure what to do. Analyzes context, checks for issues, and recommends specific skills or actions.
note
Quick capture for thoughts, observations, or ideas during research sessions. Use when the user types /note or wants to capture a quick thought without context-switching. Logs timestamped notes to activity.md. Supports both explicit /note command and natural language like "make a note" or "jot down".
ai-news-fetcher
Tavily MCPを使用して最新AIニュースを取得し、日英バイリンガルのマークダウン記事を生成。「AIニュースを取得」「最新ニュース」などで使用。
bash-script-generator
ユーザー要件に基づき、ベストプラクティスに従った堅牢なBashスクリプトを生成する
BGM Creation & YouTube Upload Agent
Suno用のBGMプロンプトを生成し、YouTubeにアップロードするためのAgent skill
chrome-ext-develop
Chrome拡張機能の開発からChrome Web Store申請準備までをサポート。「拡張機能を開発」「Chrome拡張作成」などで使用。
chrome-ext-review
Chrome Web Storeのユーザーレビューへの返信を生成。ポジティブ・ネガティブ両方に対応。「レビュー返信」「レビュー対応」などで使用。
claude-md-creator
プロジェクトの内容をもとに、最適なCLAUDE.mdを作成する(60行以下、普遍的で常に適用されるべき内容を中心にWHY/WHAT/HOWのみ)
creating-characters
Generates Nano Banana Pro prompts for original character designs. Use when user mentions "キャラクター作成", "キャラデザ", or "オリキャラ".
creating-engineer-manga
Generates Nano Banana Pro prompts for 4-panel engineer humor comics. Use when user mentions "漫画作成", "エンジニア漫画", "4コマ", or "あるある".
creating-illustrations
Generates high-quality image prompts for AI image generators (Midjourney, DALL-E, Stable Diffusion). Use when user mentions "イラスト作成", "画像プロンプト", "プロンプト生成", or "画像生成".
pixta-metadata
PIXTAへの出品用タイトル・タグを生成。「PIXTAタグ」「PIXTA出品」「ストックイラスト登録」と言われたら使用。
creating-profile-images
Generates Nano Banana Pro prompts for profile icons and SNS images. Use when user mentions "プロフィール画像", "アイコン作成", "SNS用画像", or "ヘッダー画像".
creating-tech-diagrams
Generates Nano Banana Pro prompts for technical explanation infographics. Use when user mentions "図解作成", "テック図解", or "AI解説図".
creating-thumbnails
Generates Nano Banana Pro prompts for blog and YouTube thumbnail images. Use when user mentions "サムネイル作成", "サムネ", "YouTube用画像", or "ブログ画像".
convert-image
PNG/JPG/JPEG画像をWebP、ICO、SVG形式に変換。「画像を変換して」「webpに変換」などで使用。
note-optimizer
noteプラットフォームに最適化された記事を生成・最適化。タイトル最適化、モバイル対応、ハッシュタグ生成。「note用に最適化」「note記事作成」などで使用。
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